BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G05SP1|AL430433
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig644 572 e-163
>3x_Contig644
Length = 3211
Score = 572 bits (286), Expect = e-163
Identities = 298/302 (98%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 1 gatcgttaggtttgttggtatctttcgttttctactgcagatccgatgtcctcttacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gatcgttaggtttgttggtatctttcgttttctactgcagatccgatgtcctcttacata 244
Query: 61 ctgatattttttaggaaacaacaccaccaacattaatttgcttgtcgtctccagctgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctgatattttttaggaaacaacaccaccaacattaatttgcttgtcgtctccagctgtac 184
Query: 121 ttttctcaagtctgcatatgccaatctgatcagggatagtataggtcaccagcgtataam 180
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttttctcaagtctgcatatgcaaatctgatcagggatagtataggtcaccagcgtataaa 124
Query: 181 ctacgccattcttgttttagtgtaatgtgattgtcttcacaatatttcactaccaccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctacgccattcttgttttagtgtaatgtgattgtcttcacaatatttcactaccaccata 64
Query: 241 aatcaaagtgcgtttatcgtcatataamtcgatcagttcatccattcattgttctatcgt 300
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 63 aatcaaagtgcgtttatcgtcatataaatcgatcag-tcatccattcattgttctatcgt 5
Query: 301 tt 302
||
Sbjct: 4 tt 3
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7421
Number of Sequences: 1807
Number of extensions: 7421
Number of successful extensions: 439
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)